Selected Cell
Cell:
Value:
i_gilbert
s_BII-S-3
a_gilbert-assay-Gx
a_gilbert-assay-Tx
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| Source Name | Characteristics[organism] | Term Source REF | Term Accession Number | Characteristics[geographical location] | Term Source REF | Term Accession Number | Characteristics[latitude] | Term Source REF | Term Accession Number | Characteristics[longitude] | Term Source REF | Term Accession Number | Characteristics[chlorophyll a concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[fucoxanthin concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[peridinin concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[butfucoxanthin concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[hexfucoxanthin concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[alloxanthin concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[zeaxanthin concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[lutein concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[chl-c3 concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[chl-c2 concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[prasinoxanthin concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[neoxanthin concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[violaxanthin concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[diadinoxanthin concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[diatoxanthin concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[divinyl-chl-b concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[chl-b concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[divinyl-chl-a concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[chl-a concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[BB carotene concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[bacteria count] | Unit | Term Source REF | Term Accession Number | Characteristics[synechococcus count] | Unit | Term Source REF | Term Accession Number | Characteristics[small picoeukaryotes count] | Unit | Term Source REF | Term Accession Number | Characteristics[large picoeukaryotes count] | Unit | Term Source REF | Term Accession Number | Characteristics[nanoflagellates count] | Unit | Term Source REF | Term Accession Number | Characteristics[cryptophytes count] | Unit | Term Source REF | Term Accession Number | Characteristics[phosphate concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[nitrate concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[particulate organic nitrogen concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[particulate organic carbon concentration] | Unit | Term Source REF | Term Accession Number | Characteristics[primary production depth integrated production to 3 m expressed_in mgC m-2 d-1] | Unit | Term Source REF | Term Accession Number | Characteristics[water salinity] | Unit | Term Source REF | Term Accession Number | Characteristics[fluorescence] | Term Source REF | Term Accession Number | Characteristics[water temperature at 3 meter depth] | Unit | Term Source REF | Term Accession Number | Protocol REF | Parameter Value[filter pore size] | Unit | Term Source REF | Term Accession Number | Sample Name | Factor Value[compound] | Term Source REF | Term Accession Number | Factor Value[dose] | Term Source REF | Term Accession Number | Factor Value[collection time] | Term Source REF | Term Accession Number |
| GSM255770 | marine metagenome | Norway, fjord, coastal | 5 13' 20'' E | 60 16' 10'' N | 9.23 | ug/l | 0.54 | ug/l | 0.18 | ug/l | 0.14 | ug/l | 0.82 | ug/l | 0.36 | ug/l | 0.35 | ug/l | 0.37 | ug/l | 0.29 | ug/l | 0.59 | ug/l | 0 | ug/l | 0 | ug/l | 0.64 | ug/l | 0.46 | ug/l | 0.1 | ug/l | 0 | ug/l | 5.25 | ug/l | 0 | ug/l | 9.23 | ug/l | 0.72 | ug/l | 4666004 | number/ml | 7064 | number/ml | 36257 | number/ml | 5450 | number/ml | 2851 | number/ml | 660 | number/ml | 0.23 | umol/l | 7.53 | umol/l | 143 | ug/l | 844 | ug/l | 591.4 | mg/m2/d | 31.3 | psu | 17.6 | 9.7 | degree celsius | sample collection - standard procedure 1 | 0.22 | micrometer | GSM255770 | CO2 | high | may 13th, 2006 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GSM255771 | marine metagenome | Norway, fjord, coastal | 5 13' 20'' E | 60 16' 10'' N | 11.22 | ug/l | 1.43 | ug/l | 0.14 | ug/l | 0.17 | ug/l | 1.15 | ug/l | 0.33 | ug/l | 0.23 | ug/l | 0.41 | ug/l | 0.65 | ug/l | 0.87 | ug/l | 0 | ug/l | 0 | ug/l | 0.99 | ug/l | 0.64 | ug/l | 0.11 | ug/l | 0 | ug/l | 5.97 | ug/l | 0 | ug/l | 11.22 | ug/l | 0.83 | ug/l | 4862861 | number/ml | 13867 | number/ml | 38513 | number/ml | 12035 | number/ml | 4390 | number/ml | 1702 | number/ml | 0.19 | umol/l | 3.84 | umol/l | 104 | ug/l | 561 | ug/l | 938.1 | mg/m2/d | 31.4 | psu | 23.6 | 9.6 | degree celsius | sample collection - standard procedure 1 | 0.22 | micrometer | GSM255771 | CO2 | normal | may 13th, 2006 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GSM255772 | marine metagenome | Norway, fjord, coastal | 5 13' 20'' E | 60 16' 10'' N | 1.6 | ug/l | 0.21 | ug/l | 0.41 | ug/l | 0.06 | ug/l | 0.15 | ug/l | 0.03 | ug/l | 0.13 | ug/l | 0.02 | ug/l | 0.05 | ug/l | 0.31 | ug/l | 0 | ug/l | 0 | ug/l | 0.05 | ug/l | 0.2 | ug/l | 0.04 | ug/l | 0 | ug/l | 0.21 | ug/l | 0 | ug/l | 1.6 | ug/l | 0.06 | ug/l | 9516120 | number/ml | 16465 | number/ml | 21435 | number/ml | 878 | number/ml | 138 | number/ml | 75 | number/ml | 0.2 | umol/l | 3.94 | umol/l | 128 | ug/l | 783 | ug/l | 118 | mg/m2/d | 31.5 | psu | 4.5 | 9 | degree celsius | sample collection - standard procedure 1 | 0.22 | micrometer | GSM255772 | CO2 | high | may 19th, 2006 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GSM255773 | marine metagenome | Norway, fjord, coastal | 5 13' 20'' E | 60 16' 10'' N | 1.77 | ug/l | 0.19 | ug/l | 0.26 | ug/l | 0.03 | ug/l | 0.27 | ug/l | 0.05 | ug/l | 0.13 | ug/l | 0.02 | ug/l | 0.07 | ug/l | 0.3 | ug/l | 0 | ug/l | 0 | ug/l | 0.1 | ug/l | 0.21 | ug/l | 0.05 | ug/l | 0 | ug/l | 0.43 | ug/l | 0 | ug/l | 1.77 | ug/l | 0.12 | ug/l | 6143892 | number/ml | 22049 | number/ml | 42927 | number/ml | 2916 | number/ml | 283 | number/ml | 216 | number/ml | 0.25 | umol/l | 0.59 | umol/l | 166 | ug/l | 945 | ug/l | 129.9 | mg/m2/d | 31.5 | psu | 4.1 | 8.9 | degree celsius | sample collection - standard procedure 1 | 0.22 | micrometer | GSM255773 | CO2 | normal | may 19th, 2006 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
A
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| Sample Name | Protocol REF | Protocol REF | Extract Name | Material Type | Term Source REF | Term Accession Number | Protocol REF | Assay Name | Protocol REF | Protocol REF | Raw Data File |
| GSM255770 | nucleic acid extraction - standard procedure 2 | mRNA extraction - standard procedure 3 | GSM255770.e1 | mRNA | reverse transcription - standard procedure 5 | assay1 | pyrosequencing - standard procedure 6 | sequence analysis - standard procedure 7 | ftp://ftp.ncbi.nih.gov/pub/TraceDB/ShortRead/SRA000266/EWOEPZA01.sff | ||
| GSM255771 | nucleic acid extraction - standard procedure 2 | mRNA extraction - standard procedure 3 | GSM255771.e1 | mRNA | reverse transcription - standard procedure 5 | assay2 | pyrosequencing - standard procedure 6 | sequence analysis - standard procedure 7 | ftp://ftp.ncbi.nih.gov/pub/TraceDB/ShortRead/SRA000266/EWOEPZA02.sff | ||
| GSM255772 | nucleic acid extraction - standard procedure 2 | mRNA extraction - standard procedure 3 | GSM255772.e1 | mRNA | reverse transcription - standard procedure 5 | assay3 | pyrosequencing - standard procedure 6 | sequence analysis - standard procedure 7 | ftp://ftp.ncbi.nih.gov/pub/TraceDB/ShortRead/SRA000266/EXHS9OF01.sff | ||
| GSM255772 | nucleic acid extraction - standard procedure 2 | mRNA extraction - standard procedure 3 | GSM255772.e1 | mRNA | reverse transcription - standard procedure 5 | assay3 | pyrosequencing - standard procedure 6 | sequence analysis - standard procedure 7 | ftp://ftp.ncbi.nih.gov/pub/TraceDB/ShortRead/SRA000266/EX398L102.sff | ||
| GSM255773 | nucleic acid extraction - standard procedure 2 | mRNA extraction - standard procedure 3 | GSM255773.e1 | mRNA | reverse transcription - standard procedure 5 | assay4 | pyrosequencing - standard procedure 6 | sequence analysis - standard procedure 7 | ftp://ftp.ncbi.nih.gov/pub/TraceDB/ShortRead/SRA000266/EXHS9OF02.sff | ||
| GSM255773 | nucleic acid extraction - standard procedure 2 | mRNA extraction - standard procedure 3 | GSM255773.e1 | mRNA | reverse transcription - standard procedure 5 | assay4 | pyrosequencing - standard procedure 6 | sequence analysis - standard procedure 7 | ftp://ftp.ncbi.nih.gov/pub/TraceDB/ShortRead/SRA000266/EX398L101.sff | ||
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| Sample Name | Protocol REF | Protocol REF | Extract Name | Material Type | Term Source REF | Term Accession Number | Protocol REF | Assay Name | Raw Data File | Protocol REF | Data Transformation Name | Derived Data File |
| GSM255770 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255770.e2 | DNA | pyrosequencing - standard procedure 6 | assay5 | EVHINN102.sff | sequence analysis - standard procedure 7 | data_transform5 | GSE10119_series_matrix.txt | ||
| GSM255770 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255770.e2 | DNA | pyrosequencing - standard procedure 6 | assay5 | EVHINN101.sff | sequence analysis - standard procedure 7 | data_transform5 | GSE10119_series_matrix.txt | ||
| GSM255770 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255770.e2 | DNA | pyrosequencing - standard procedure 6 | assay5 | EVHINN104.sff | sequence analysis - standard procedure 7 | data_transform5 | GSE10119_series_matrix.txt | ||
| GSM255770 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255770.e2 | DNA | pyrosequencing - standard procedure 6 | assay5 | EVHINN103.sff | sequence analysis - standard procedure 7 | data_transform5 | GSE10119_series_matrix.txt | ||
| GSM255770 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255770.e2 | DNA | pyrosequencing - standard procedure 6 | assay5 | EVNG8PH01.sff | sequence analysis - standard procedure 7 | data_transform5 | GSE10119_series_matrix.txt | ||
| GSM255770 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255770.e2 | DNA | pyrosequencing - standard procedure 6 | assay5 | EVUSNDQ01.sff | sequence analysis - standard procedure 7 | data_transform5 | GSE10119_series_matrix.txt | ||
| GSM255771 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255771.e2 | DNA | pyrosequencing - standard procedure 6 | assay6 | EVNG8PH02.sff | sequence analysis - standard procedure 7 | data_transform6 | GSE10119_series_matrix.txt | ||
| GSM255771 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255771.e2 | DNA | pyrosequencing - standard procedure 6 | assay6 | EVUSNDQ02.sff | sequence analysis - standard procedure 7 | data_transform6 | GSE10119_series_matrix.txt | ||
| GSM255771 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255771.e2 | DNA | pyrosequencing - standard procedure 6 | assay6 | EVHINN108.sff | sequence analysis - standard procedure 7 | data_transform6 | GSE10119_series_matrix.txt | ||
| GSM255771 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255771.e2 | DNA | pyrosequencing - standard procedure 6 | assay6 | EVHINN107.sff | sequence analysis - standard procedure 7 | data_transform6 | GSE10119_series_matrix.txt | ||
| GSM255771 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255771.e2 | DNA | pyrosequencing - standard procedure 6 | assay6 | EVHINN106.sff | sequence analysis - standard procedure 7 | data_transform6 | GSE10119_series_matrix.txt | ||
| GSM255771 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255771.e2 | DNA | pyrosequencing - standard procedure 6 | assay6 | EVHINN105.sff | sequence analysis - standard procedure 7 | data_transform6 | GSE10119_series_matrix.txt | ||
| GSM255772 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255772.e2 | DNA | pyrosequencing - standard procedure 6 | assay7 | EVNG8PH03.sff | sequence analysis - standard procedure 7 | data_transform7 | GSE10119_series_matrix.txt | ||
| GSM255772 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255772.e2 | DNA | pyrosequencing - standard procedure 6 | assay7 | EVUSNDQ03.sff | sequence analysis - standard procedure 7 | data_transform7 | GSE10119_series_matrix.txt | ||
| GSM255772 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255772.e2 | DNA | pyrosequencing - standard procedure 6 | assay7 | EVHINN110.sff | sequence analysis - standard procedure 7 | data_transform7 | GSE10119_series_matrix.txt | ||
| GSM255772 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255772.e2 | DNA | pyrosequencing - standard procedure 6 | assay7 | EVHINN109.sff | sequence analysis - standard procedure 7 | data_transform7 | GSE10119_series_matrix.txt | ||
| GSM255772 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255772.e2 | DNA | pyrosequencing - standard procedure 6 | assay7 | EVHINN111.sff | sequence analysis - standard procedure 7 | data_transform7 | GSE10119_series_matrix.txt | ||
| GSM255772 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255772.e2 | DNA | pyrosequencing - standard procedure 6 | assay7 | EVHINN112.sff | sequence analysis - standard procedure 7 | data_transform7 | GSE10119_series_matrix.txt | ||
| GSM255773 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255773.e2 | DNA | pyrosequencing - standard procedure 6 | assay8 | EVNG8PH04.sff | sequence analysis - standard procedure 7 | data_transform8 | GSE10119_series_matrix.txt | ||
| GSM255773 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255773.e2 | DNA | pyrosequencing - standard procedure 6 | assay8 | EVUSNDQ04.sff | sequence analysis - standard procedure 7 | data_transform8 | GSE10119_series_matrix.txt | ||
| GSM255773 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255773.e2 | DNA | pyrosequencing - standard procedure 6 | assay8 | EVHINN114.sff | sequence analysis - standard procedure 7 | data_transform8 | GSE10119_series_matrix.txt | ||
| GSM255773 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255773.e2 | DNA | pyrosequencing - standard procedure 6 | assay8 | EVHINN113.sff | sequence analysis - standard procedure 7 | data_transform8 | GSE10119_series_matrix.txt | ||
| GSM255773 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255773.e2 | DNA | pyrosequencing - standard procedure 6 | assay8 | EVHINN116.sff | sequence analysis - standard procedure 7 | data_transform8 | GSE10119_series_matrix.txt | ||
| GSM255773 | nucleic acid extraction - standard procedure 2 | genomic DNA extraction - standard procedure 4 | GSM255773.e2 | DNA | pyrosequencing - standard procedure 6 | assay8 | EVHINN115.sff | sequence analysis - standard procedure 7 | data_transform8 | GSE10119_series_matrix.txt | ||
